Insertion junction: CLIP2.074381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074381
Chromosome:chromosome 13
Location:1489597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572450 (1 of 1) PTHR26402:SF538 - TWO-COMPONENT RESPONSE REGULATOR ARR19-RELATED 5'UTR
Cre13.g572500 COA2,CGL14 (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACTGCCACCGGCCCTGCCTCAAGGTGTTGTATAAGGCCCACTCGACA
Internal bar code:GTATTGTCGACTATGAATGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTGTCAGGGCATGTGAC
Suggested primer 2:TCGGGAAATTCGGTCGGTTT