Insertion junction: CLIP2.074445_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074445
Chromosome:chromosome 2
Location:803584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078507 (1 of 1) IPR006311//IPR025585 - Twin-arginine translocation pathway, signal sequence // Photosystem II Pbs27 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTGAGGCGAAGGGGCTGACCCCATCTTGGCAACCATCCCTCTAAGG
Internal bar code:CATCGGCCTTGCCCAATACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1996
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTTACGCGGTCTGTCT
Suggested primer 2:CGCTAGCGATGGCAGTTCTA