Gene: Cre02.g078507

Overview

Common name:
Defline:(1 of 1) IPR006311//IPR025585 - Twin-arginine translocation pathway, signal sequence // Photosystem II Pbs27
Description:
Synonyms:g1424.t1,Cre02.g078507.t1.1
Chromosome:chromosome 2

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC2D01

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

chloroplast/not homogeneous/not pyrenoid depleted

cytosol/cytosol (strong signal)

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.025000_1 CLIP2.025000 intron 80 6.1
CLIP2.025000_2 CLIP2.025000 intron 80 6.1
CLIP2.059100_1 CLIP2.059100 5'UTR 80 6.1
CLIP2.063528_1 CLIP2.063528 intron 40 6.1
CLIP2.065764_1 CLIP2.065764 3'UTR 80 6.1
CLIP2.065764_2 CLIP2.065764 3'UTR 80 6.1
CLIP2.074445_1 CLIP2.074445 5'UTR 80 6.1
LMJ.RY0402.042043_1 LMJ.RY0402.042043 intron 95 5.5
LMJ.RY0402.042043_2 LMJ.RY0402.042043 5'UTR 95 5.5
LMJ.RY0402.049050_1 LMJ.RY0402.049050 intron 73 5.5
LMJ.RY0402.088017_1 LMJ.RY0402.088017 3'UTR 95 5.5
LMJ.RY0402.088017_2 LMJ.RY0402.088017 3'UTR 95 5.5
LMJ.RY0402.115273_1 LMJ.RY0402.115273 intron 58 5.5
LMJ.RY0402.144109_1 LMJ.RY0402.144109 gene_edge/mRNA_edge/3'UTR 95 5.5
LMJ.RY0402.144109_2 LMJ.RY0402.144109 3'UTR 95 5.5
LMJ.RY0402.165115_1 LMJ.RY0402.165115 intron 73 5.5
LMJ.RY0402.200136_1 LMJ.RY0402.200136 3'UTR 73 5.5
LMJ.RY0402.225432_1 LMJ.RY0402.225432 intron 95 5.5
LMJ.RY0402.225432_2 LMJ.RY0402.225432 intron 95 5.5

Gene Annotations

PFAM:PF13326
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0010207
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

High temperature, screen 7 of 7 ( 83% confidence (FDR = 0.17))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.