Insertion junction: LMJ.RY0402.049050_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.049050
Chromosome:chromosome 2
Location:744835
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g078507 (1 of 1) IPR006311//IPR025585 - Twin-arginine translocation pathway, signal sequence // Photosystem II Pbs27 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTCCGAAAGCTGTGGGTAGCCGGGGTG
Internal bar code:TGCGGTTGAACGGAATGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:893
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:432
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGTTCCTTCACCACCCG
Suggested primer 2:CAACCTGTGACAACCTGTGG