Insertion junction: CLIP2.074690_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074690
Chromosome:chromosome 5
Location:3361393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232751 (1 of 2) PTHR23518:SF2 - MULTIDRUG RESISTANCE PROTEIN MDTH 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGTGTTGAAAGCGGGGGGTGGGCTGGGGAAGATTTTCAGCAGGTAG
Internal bar code:GAACTATATAGAGGTGGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCACCTTCAACGAGCAT
Suggested primer 2:TCTGGGTCTCCGGTGTCTAG