Insertion junction: CLIP2.074879_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074879
Chromosome:chromosome 16
Location:1173837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650450 FAP219 Flagellar Associated Protein 219 5'UTR
Cre16.g650500 (1 of 1) K06195 - ApaG protein (apaG) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCAAAATGATGCGCAGGTCGGCTTCAACTCAAAAGACTAGCCGCTGT
Internal bar code:AGAGTTCTGCAAACATCGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1556
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTCCACGTTTGGTAT
Suggested primer 2:GGTTAAGAGGGGAAACGGGG