Insertion junction: CLIP2.074902_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074902
Chromosome:chromosome 12
Location:5082276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525650 SUFS,SUFS1,CSD4 (1 of 1) K11717 - cysteine desulfurase / selenocysteine lyase (sufS); Group II cysteine desulfurase 5'UTR
Cre12.g525700 HCS1 Cytochrome c heme lyase; (1 of 2) 4.4.1.17 - Holocytochrome-c synthase / Cytochrome c synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACATGGATTTTCGAGAGCGAGGCCTGGGAAGAAAAGGAAGGTTCGCT
Internal bar code:AAGTTAGGTTACGTTCGAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1653
LEAP-Seq percent confirming:85.3659
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGTCTACACCAGCCTT
Suggested primer 2:GTCCAGGTAGACCAGGGGAT