Insertion junction: CLIP2.074995_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074995
Chromosome:chromosome 16
Location:6732621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673001 FAD4,LCI2 (1 of 1) PTHR24067:SF41 - AKT-INTERACTING PROTEIN; Fatty acide desaturase 4 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGCCGGCCCTGCTTTAGACTGTGTTGCAGACTCACAGCTCATGGCC
Internal bar code:GCCTTATATGTTTGACTACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:536
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTGAGTTGGGGAAAGC
Suggested primer 2:GAGCAGGCAGAGATAGAGCG