Insertion junction: CLIP2.075250_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075250
Chromosome:chromosome 6
Location:6593886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294400 NIS1 (1 of 1) K06171 - nicastrin (NCSTN); Nicastrin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAAGTCATGTCCGTGCACAACAGGGGTCAATCAGCAGCGTCACATGCC
Internal bar code:TGCGTGAGCGATGAGGTACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1936
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTTACCAAGCAAGGTTG
Suggested primer 2:CCCCAAACTTTCTGCATGGC