Insertion junction: CLIP2.075613_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075613
Chromosome:chromosome 3
Location:8080867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201200 FAP283 Flagellar Associated Protein 283 5'UTR
Cre03.g201250 (1 of 1) PF01585//PF12171 - G-patch domain (G-patch) // Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATTTGTAATACTGCAATAAGCAGATATACACTATGTTTCTTAAATCTA
Internal bar code:AGGTTAGTCGTTGGCTCATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:670
LEAP-Seq percent confirming:12.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTATCTCCAGCCGCTTG
Suggested primer 2:CTGCAGTTACAGGGCAAGGA