Insertion junction: CLIP2.075706_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075706
Chromosome:chromosome 12
Location:2749862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504300 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGGACAGTCCGACAAGCGGGGGCACACCGTACCCACGCCGCGAGGG
Internal bar code:CGCTTTGTCACACCCGCTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2998
LEAP-Seq percent confirming:56.8182
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGGTGTTTCGGCTTG
Suggested primer 2:CATCGTGGGCTTCATCACCT