Insertion junction: CLIP2.075752_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075752
Chromosome:chromosome 1
Location:4036425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026650 (1 of 1) PTHR23293//PTHR23293:SF5 - FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE // PHOSPHOADENOSINE PHOSPHOSULFATE REDUCTASE 3'UTR
Cre01.g026700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGCTCCACATTACCACACCACCGCGATGCTCCACGCACCGTTCCGG
Internal bar code:ACGAACCATATGTTTGTAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1826
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GATTTGCCTTCCGCGAGAAC
Suggested primer 2:CCCTACCTGCAAGCAATCCA