Insertion junction: CLIP2.076064_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076064
Chromosome:chromosome 12
Location:1357421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489150 SHD1 SH2-domain protein; (1 of 2) IPR000980 - SH2 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCCCAGCCGACTAGGAAAGTGGCTCTCCCTCTCAAGGGAAAGGCGGG
Internal bar code:TCGCCGAATCTCATACTCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1481
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCGGTGGGTGTCATGAAC
Suggested primer 2:ACACTCCCTAGCCGAGTCAT