Insertion junction: CLIP2.076069_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076069
Chromosome:chromosome 1
Location:5465296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038650 SRS2 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12900 - FUS-interacting serine-arginine-rich protein 1 (FUSIP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTGCGTGCCCCGGTGAGGCCCTCACATAGGTAAGCCTTCGCACACA
Internal bar code:GTAGTATTTTTTGGTGAAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:885
LEAP-Seq percent confirming:45.1613
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACGTTCCTTCGAGGGA
Suggested primer 2:GGCTTGGGTTGCTGTGAAAG