Gene: Cre01.g038650
Overview
| Common name: | SRS2 |
| Defline: | Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12900 - FUS-interacting serine-arginine-rich protein 1 (FUSIP1) |
| Description: | Serine/arginine-rich pre-mRNA splicing factor protein of the SC35-like subfamily |
| Synonyms: | g865.t1,SRS2,Cre01.g038650.t1.1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g038650 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g038650-Venus-3xFLAG
Imaged strain: CSI_LW12C2
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nucleoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.019154_1 | CLIP2.019154 | CDS | 80 | 6.1 |
| CLIP2.019154_2 | CLIP2.019154 | CDS | 80 | 6.1 |
| CLIP2.020020_1 | CLIP2.020020 | intron | 80 | 6.1 |
| CLIP2.020020_2 | CLIP2.020020 | intron | 80 | 6.1 |
| CLIP2.022814_1 | CLIP2.022814 | CDS | 80 | 6.1 |
| CLIP2.022814_2 | CLIP2.022814 | CDS | 80 | 6.1 |
| CLIP2.032053_1 | CLIP2.032053 | CDS | 80 | 6.1 |
| CLIP2.062685_1 | CLIP2.062685 | 5'UTR | 80 | 6.1 |
| CLIP2.062685_2 | CLIP2.062685 | 5'UTR | 80 | 6.1 |
| CLIP2.076069_1 | CLIP2.076069 | 3'UTR | 80 | 6.1 |
| CLIP2.076069_2 | CLIP2.076069 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.218529_1 | LMJ.RY0402.218529 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.218529_2 | LMJ.RY0402.218529 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00076 |
| PANTHER: | PTHR23147 |
| KEGG_ec: | |
| KEGG_orthology: | K12900 |
| KOG: | KOG0113 |
| Gene ontology terms:: | GO:0003676 |
| Best arabidopsis TAIR name: | AT3G13570.1 |
| Best arabidopsis TAIR symbol: | SCL30A |
| Best arabidopsis TAIR defline: | SC35-like splicing factor 30A |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.