Insertion junction: CLIP2.076535_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076535
Chromosome:chromosome 2
Location:827210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078750 PUS3 RNA pseudouridine synthase; (1 of 1) K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGACAGTCGAGCAGGAAGGCAAACGGGTTCCGACGATGAGTTTCTTCC
Internal bar code:TTTGCTAAAGGTATGGCACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2333
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGCTTTGAAAGGCGCGT
Suggested primer 2:AGGTCAAGGCCTGTTTGGAG