Insertion junction: CLIP2.076545_1

Overview

Insertion cassette:	CIB2
Side of cassette:	3'
Strand:	-
Strain:	CLIP2.076545
Chromosome:	chromosome 2
Location:	138575
Confidence (%):	80

Locus systematic id	Locus common name	Defline	Feature
Cre02.g074150	HKR1,COP5	(1 of 1) IPR001054//IPR001425//IPR001789//IPR003594//IPR003661//IPR004358//IPR005467//IPR011006//IPR013761//IPR029730//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // Archaeal/bacterial/fungal rhodopsin // Signal transduction response regulator, receiver domain // Histidine kinase-like ATPase, C-terminal domain // Signal transduction histidine kinase, dimerisation/phosphoacceptor domain // Signal transduction histidine kinase-related protein, C-terminal // Histidine kinase domain // CheY-like superfamily // Sterile alpha motif/pointed domain // Archaeal/bacterial/fungal rhodopsin-like // Nucleotide cyclase; Histidine kinase rhodopsin 1	3'UTR

Insertion site details
Expected flanking sequence (starting at cassette; orientation from cassette outwards):	GGAAGTCGTGCTGCCGCACCGCTCGTCCGCACGCCAGCACAACAAACAGA
Internal bar code:	AGTTTAACCTGTATGAGTGGCT
Confirmation - LEAP-Seq
LEAP-Seq distance:	901
LEAP-Seq percent confirming:	100.0
LEAP-Seq n confirming:	3
LEAP-Seq n nonconfirming:	0
LEAP-Seq n unique pos:	3
Suggested primers for confirmation by PCR
Suggested primer 1:	CGCGTGTTTGGTGTGTACTG
Suggested primer 2:	CGAACTCGTACCGTACCTCG