| Common name: | HKR1,COP5 |
| Defline: | (1 of 1) IPR001054//IPR001425//IPR001789//IPR003594//IPR003661//IPR004358//IPR005467//IPR011006//IPR013761//IPR029730//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // Archaeal/bacterial/fungal rhodopsin // Signal transduction response regulator, receiver domain // Histidine kinase-like ATPase, C-terminal domain // Signal transduction histidine kinase, dimerisation/phosphoacceptor domain // Signal transduction histidine kinase-related protein, C-terminal // Histidine kinase domain // CheY-like superfamily // Sterile alpha motif/pointed domain // Archaeal/bacterial/fungal rhodopsin-like // Nucleotide cyclase; Histidine kinase rhodopsin 1 |
| Description: | Also known as Chlamyopsin 5; is bimodally switched by ultraviolet and blue light; contains bacteriorhodopsin, Histine kinase, response regulator receiver and Guanylate/adenylate cyclase catalytic domains |
| Synonyms: | COP5,g1315.t2 |
| Chromosome: | chromosome 2 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.022889_1 | CLIP2.022889 | CDS | 80 | 6.1 |
| CLIP2.022889_2 | CLIP2.022889 | CDS | 80 | 6.1 |
| CLIP2.056895_1 | CLIP2.056895 | 3'UTR | 40 | 6.1 |
| CLIP2.063371_1 | CLIP2.063371 | 3'UTR | 80 | 6.1 |
| CLIP2.063371_2 | CLIP2.063371 | 3'UTR | 80 | 6.1 |
| CLIP2.064068_1 | CLIP2.064068 | 3'UTR | 80 | 6.1 |
| CLIP2.072752_1 | CLIP2.072752 | intron | 63 | 6.1 |
| CLIP2.076545_1 | CLIP2.076545 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.070987_1 | LMJ.RY0402.070987 | intron | 73 | 5.5 |
| LMJ.RY0402.087958_1 | LMJ.RY0402.087958 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.105948_1 | LMJ.RY0402.105948 | 3'UTR | 73 | 5.5 |
| PFAM: | PF00072, PF00211, PF00512, PF01036, PF02518 |
| PANTHER: | PTHR24423 PTHR24423:SF442 |
| KEGG_ec: | EC:2.7.13.3 |
| KEGG_orthology: | K02486 |
| KOG: | KOG0519 |
| Gene ontology terms:: | GO:0000155, GO:0000160, GO:0005216, GO:0006811, GO:0007165, GO:0009190, GO:0016020, GO:0016310, GO:0016772, GO:0016849, GO:0035556 |
| Best arabidopsis TAIR name: | AT2G17820.1 |
| Best arabidopsis TAIR symbol: | AHK1,ATHK1,HK1 |
| Best arabidopsis TAIR defline: | histidine kinase 1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.