Insertion junction: CLIP2.076759_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076759
Chromosome:plastome
Location:64706
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802291 ChreCp027,psbZ,2716976 photosystem II reaction center Z protein; (1 of 1) K02724 - photosystem II PsbZ protein (psbZ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTTGCTGCAGTATATAAATATAGAATGTTAATACTGCGGAGCAGGCA
Internal bar code:GATTTGGTTAACATATGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACTTTAGTCTTGCGCAG
Suggested primer 2:ACGTTGCACCGTGTTTGTTC