Insertion junction: CLIP2.076839_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076839
Chromosome:chromosome 3
Location:6751236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196400 EPC1 (1 of 1) K11322 - enhancer of polycomb-like protein (EPC) 5'UTR
Cre03.g196450 (1 of 1) K15178 - RNA polymerase-associated protein RTF1 (RTF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGTTTGCAGCGGCATGTCTGCCGTGTCAGTGTCTCCGTTCAGATGC
Internal bar code:TGAATTTGTAGATGGTGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTGTAGGGTTGGGAAG
Suggested primer 2:AATGTTCAGCTGTCTGCCGA