Insertion junction: CLIP2.076990_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076990
Chromosome:chromosome 13
Location:633400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565850 COPA1 Alpha subunit of COP-I complex; (1 of 1) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATAAAAGGGGTAGCGCCAAGTTGCTACCCGAGAACCAGATCAAGGGA
Internal bar code:GTCCTATTAGATTGGCTTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACTCGTGGTGGAACTGCAC
Suggested primer 2:AGCCGTGCAAGCTCATAACT