Insertion junction: CLIP2.076993_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076993
Chromosome:chromosome 12
Location:8545784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549100 UAF3,SPL10 splicing factor U2AF 65 kDa subunit; (1 of 2) PTHR23139//PTHR23139:SF58 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGATGGGGTAACGCCTCGGCAATCGTGTCGGCAATGTTTGCGGCAAGT
Internal bar code:ATGTTATATGGATTGAACTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCGATCTCTCCATTCCA
Suggested primer 2:TGACCCTTCTCGCTGTCAAC