Insertion junction: CLIP2.077547_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077547
Chromosome:plastome
Location:66744
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802292 ccsA,ChreCp028,2717027,ycf5 (1 of 1) PTHR30071//PTHR30071:SF8 - HEME EXPORTER PROTEIN C // CYTOCHROME C BIOGENESIS PROTEIN CCSA; cytochrome c biogenesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTGGAGTTGGGATCCAAAAGAAACATGGGCGTTATTAACGTGGTTAG
Internal bar code:GTATAAGAACATTTATGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCAGCCCCAAAGTAGA
Suggested primer 2:TGGGCTGTTGGGTGTTTCTT