Insertion junction: CLIP2.078008_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078008
Chromosome:chromosome 8
Location:2357135
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g371450 COPZ1 Zeta subunit of COP-I complex; (1 of 1) PTHR11043//PTHR11043:SF0 - ZETA-COAT PROTEIN // COATOMER SUBUNIT ZETA-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCTACGACACGTCGCCCCGGCCATGGTCAGGGCCTCTACATGGCTG
Internal bar code:TGGGGACCCCGTGGACGAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCGTGCTACAAGCGTT
Suggested primer 2:CATTTCAAAGTTGCCCCGCA