Insertion junction: CLIP2.078170_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078170
Chromosome:chromosome 3
Location:6457845
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTCAGTACAGAGCGCTGGCAGAGACAACACATGACGCGGACAAACGC
Internal bar code:GTTCGTATTATACTGGCTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:533
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACAACGGAAAGGAGGC
Suggested primer 2:TTCTGCTGCACTACACCAGG