Insertion junction: CLIP2.078296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078296
Chromosome:chromosome 3
Location:4620226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTAAACGCGGAGACGCTTTCCCCGTCGCTGGCTCGTAATAACAGCGC
Internal bar code:TTGTTTTACATTGGTTCATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:489
LEAP-Seq percent confirming:45.7143
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCGTCCCAGTTGGTCA
Suggested primer 2:TGGAAGCGTCCCATTACACC