Insertion junction: CLIP2.078296_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078296
Chromosome:chromosome 3
Location:4620238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGAACGCCGAAAACACGAGTCACTGCTGTTTTGTAAAGCCGGTAAATG
Internal bar code:GCCCTACTGCGCAGAGAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAGCGTCCCATTACACC
Suggested primer 2:CATGTCGTCCCAGTTGGTCA