Insertion junction: CLIP2.078299_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078299
Chromosome:chromosome 3
Location:2346985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158250 SCY2,SECY2 (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC; Preprotein translocase secY subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCCATCGGTGCAATCGCGTCTCCGCCTGTTTGCTAGCTAGCCTTG
Internal bar code:TCCGGCAAGTAGTACGAGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1585
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTACAACACCCAGTGC
Suggested primer 2:TGCTGCTTCGTGTGAAAAGC