Insertion junction: CLIP2.078590_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078590
Chromosome:chromosome 16
Location:5392153
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g683050 RNJ1 (1 of 1) 3.5.2.6 - Beta-lactamase / Penicillinase; chloroplast RNase J CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGTGGCCGGGTCCAGAGCCGGAACCACCTGGGGAGGGGGGGAGCAG
Internal bar code:GCCCGCTGTAGGTCTGCTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAGATCCTACCCGACACCGA
Suggested primer 2:ACGTTTGTGGAGTCGCTCAT