| Common name: | RNJ1 |
| Defline: | (1 of 1) 3.5.2.6 - Beta-lactamase / Penicillinase; chloroplast RNase J |
| Description: | Ribonuclease J homolog; the B. subtilis protein carries both RNase E-like endoribonuclease and 5'-3' exoribonuclease activity. In Chlamydomonas, an alternate splice variant in the C-terminal region has been observed. |
| Synonyms: | RNJ1,g16441.t1 |
| Chromosome: | chromosome 16 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.060435_1 | CLIP2.060435 | CDS | 63 | 6.1 |
| CLIP2.076256_1 | CLIP2.076256 | intron | 63 | 6.1 |
| CLIP2.078590_1 | CLIP2.078590 | CDS | 63 | 6.1 |
| LMJ.RY0402.046013_4 | LMJ.RY0402.046013 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.112753_1 | LMJ.RY0402.112753 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.234288_1 | LMJ.RY0402.234288 | CDS | 95 | 5.5 |
| LMJ.RY0402.234288_2 | LMJ.RY0402.234288 | CDS | 95 | 5.5 |
| PFAM: | PF07521, PF12706 |
| PANTHER: | PTHR11203 PTHR11203:SF22 |
| KEGG_ec: | EC:3.5.2.6 |
| KEGG_orthology: | |
| KOG: | KOG1136 |
| Gene ontology terms:: | GO:0003723, GO:0046872 |
| Best arabidopsis TAIR name: | AT5G63420 |
| Best arabidopsis TAIR symbol: | emb2746 |
| Best arabidopsis TAIR defline: | RNA-metabolising metallo-beta-lactamase family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.