Insertion junction: LMJ.RY0402.234288_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.234288
Chromosome:chromosome 16
Location:5197219
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g683050 RNJ1 (1 of 1) 3.5.2.6 - Beta-lactamase / Penicillinase; chloroplast RNase J CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAGGTCATTGCGGACCGGCGGCAGCGC
Internal bar code:GCCGGTGAATTACACCGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:779
LEAP-Seq percent confirming:99.055
LEAP-Seq n confirming:11635
LEAP-Seq n nonconfirming:111
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAGTTTTTGCAGTCGC
Suggested primer 2:GGCGATACTGTGAGGTTGGT