Insertion junction: LMJ.RY0402.234288_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.234288
Chromosome:chromosome 16
Location:5197214
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g683050 RNJ1 (1 of 1) 3.5.2.6 - Beta-lactamase / Penicillinase; chloroplast RNase J CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGTCAGCGTCCCGGCGCCCTCCTCGC
Internal bar code:CTAACTCGCGTACTAATGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:199
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAGTTTTTGCAGTCGC
Suggested primer 2:GGCGATACTGTGAGGTTGGT