Insertion junction: LMJ.RY0402.046013_4

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046013
Chromosome:chromosome 16
Location:5197717
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g683050 RNJ1 (1 of 1) 3.5.2.6 - Beta-lactamase / Penicillinase; chloroplast RNase J 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGTAACTAGTACCTGTGAGCTACGCG
Internal bar code:GTGCTAGCGTCTATTATGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:99.9206
LEAP-Seq n confirming:1258
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAGTGACTTGTCCGTT
Suggested primer 2:CCGATTACGGCTAAGGTGTC