Insertion junction: CLIP2.078779_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078779
Chromosome:chromosome 3
Location:6751426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196400 EPC1 (1 of 1) K11322 - enhancer of polycomb-like protein (EPC) 5'UTR
Cre03.g196450 (1 of 1) K15178 - RNA polymerase-associated protein RTF1 (RTF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCTTGGTGTACGTGCAGCATGCCACGCTGGGCAGGGGAACGGGTCAG
Internal bar code:TAATGATCGGCTGGATGACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4626
LEAP-Seq percent confirming:83.1579
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCTAGGGCGCAAAATC
Suggested primer 2:TCTCCCGACGTGAAACCAAG