Insertion junction: LMJ.RY0402.038874_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.038874
Chromosome:chromosome 17
Location:3890989
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTAGTGCGGCCGTCGCTGCCGCCCTTC
Internal bar code:GGAACGTGGTACTTGTGAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:975
LEAP-Seq percent confirming:99.3138
LEAP-Seq n confirming:1592
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGGCCTGAAAGTTAAA
Suggested primer 2:CGCTCAAAGTAAGCTGGTCC