Insertion junction: LMJ.RY0402.040456_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.040456
Chromosome:chromosome 6
Location:1659853
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g261026 (1 of 1) IPR001478//IPR014756 - PDZ domain // Immunoglobulin E-set CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGGACACCTGGCGGCGGGGGGAGGGG
Internal bar code:CGCCCTCGTTTCACCGGTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:34.3891
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:145
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCTTTCCATCTTCCCT
Suggested primer 2:CAAACACACAGAAACCCGTG