Insertion junction: LMJ.RY0402.041015_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.041015
Chromosome:chromosome 10
Location:3094075
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g441650 (1 of 1) PF06650//PF16908 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGAACGTGCTGCTCATCAGCAGGCTGC
Internal bar code:GACTACTTACAACCCTCCCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:99.0114
LEAP-Seq n confirming:3205
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGGATTGACCTTGATG
Suggested primer 2:ATGGAGACCATCAACTTCCG