Insertion junction: LMJ.RY0402.041109_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.041109
Chromosome:chromosome 10
Location:2930126
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g440300 SMC5A (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTGCGTGCTGCGCACCGCACGCTCAGG
Internal bar code:CCCTCCCTTTGAGTTGTAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:745
LEAP-Seq percent confirming:99.5468
LEAP-Seq n confirming:3075
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACGCTGACCACAACTTA
Suggested primer 2:AGGAAGGAGACACTGCGAAA