Gene: Cre10.g440300

Overview

Common name:	SMC5A
Defline:	(1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein
Description:	Subunit of the condensin complex, which reorganizes chromosomes during cell division; coiled-coil protein of the SMC family involved in chromosome condensation and segregation. This is one of two SMC5 genes near each other on scaffold 10.
Synonyms:	g10838.t1,SMC5A
Chromosome:	chromosome 10

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.010607_1	CLIP2.010607	intron	80	6.1
CLIP2.010607_2	CLIP2.010607	intron	80	6.1
CLIP2.024730_1	CLIP2.024730	CDS	80	6.1
CLIP2.031242_1	CLIP2.031242	intron	80	6.1
CLIP2.031242_2	CLIP2.031242	intron	80	6.1
CLIP2.032480_1	CLIP2.032480	intron	80	6.1
CLIP2.032480_2	CLIP2.032480	intron	80	6.1
CLIP2.039299_1	CLIP2.039299	intron	80	6.1
CLIP2.039299_2	CLIP2.039299	intron	80	6.1
CLIP2.043301_1	CLIP2.043301	intron	80	6.1
CLIP2.043301_2	CLIP2.043301	intron	80	6.1
LMJ.RY0402.041109_2	LMJ.RY0402.041109	5'UTR	73	5.5
LMJ.RY0402.043874_2	LMJ.RY0402.043874	intron	73	5.5
LMJ.RY0402.070872_1	LMJ.RY0402.070872	intron	73	5.5
LMJ.RY0402.085977_2	LMJ.RY0402.085977	5'UTR	73	5.5
LMJ.RY0402.087722_1	LMJ.RY0402.087722	5'UTR	73	5.5
LMJ.RY0402.106752_1	LMJ.RY0402.106752	CDS	73	5.5
LMJ.RY0402.135478_1	LMJ.RY0402.135478	3'UTR	95	5.5
LMJ.RY0402.135478_2	LMJ.RY0402.135478	3'UTR	95	5.5
LMJ.RY0402.142890_1	LMJ.RY0402.142890	3'UTR	73	5.5
LMJ.RY0402.157081_1	LMJ.RY0402.157081	intron	73	5.5
LMJ.RY0402.159434_1	LMJ.RY0402.159434	intron	73	5.5
LMJ.RY0402.167490_1	LMJ.RY0402.167490	3'UTR	95	5.5
LMJ.RY0402.167490_2	LMJ.RY0402.167490	3'UTR	95	5.5
LMJ.RY0402.172721_1	LMJ.RY0402.172721	intron	73	5.5
LMJ.RY0402.175567_1	LMJ.RY0402.175567	intron	95	5.5
LMJ.RY0402.175567_2	LMJ.RY0402.175567	intron	95	5.5
LMJ.RY0402.227211_1	LMJ.RY0402.227211	intron	95	5.5
LMJ.RY0402.227211_2	LMJ.RY0402.227211	intron	95	5.5
LMJ.RY0402.248012_1	LMJ.RY0402.248012	intron	73	5.5

Gene Annotations

PFAM:	PF13476
PANTHER:	PTHR19306 PTHR19306:SF1
KEGG_ec:
KEGG_orthology:
KOG:	KOG0979
Gene ontology terms::	GO:0000724, GO:0006281, GO:0030915
Best arabidopsis TAIR name:	AT5G15920.1
Best arabidopsis TAIR symbol:	SMC5
Best arabidopsis TAIR defline:	structural maintenance of chromosomes 5
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.