Insertion junction: LMJ.RY0402.159434_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.159434
Chromosome:chromosome 10
Location:2927740
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g440300 SMC5A (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAAAGCAGGAGTGTGCGTCTAGACGGT
Internal bar code:GGCCATACGCGTCGAGGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:95.8229
LEAP-Seq n confirming:30212
LEAP-Seq n nonconfirming:1317
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGAGAACACGGAGAAGG
Suggested primer 2:TTCACAGCTCAGCATTCCAC