Insertion junction: LMJ.RY0402.070872_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.070872
Chromosome:chromosome 10
Location:2926274
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g440300 SMC5A (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGACCGCCCACCCGACGCCTTCCGGTT
Internal bar code:CCACGCGGGCCCGTCCTCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:288
LEAP-Seq percent confirming:95.843
LEAP-Seq n confirming:3735
LEAP-Seq n nonconfirming:162
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTAGACCGTGTTGATG
Suggested primer 2:GTGGAATGCTGAGCTGTGAA