Insertion junction: LMJ.RY0402.106752_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.106752
Chromosome:chromosome 10
Location:2927875
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g440300 SMC5A (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGGAGGTGGATCAGGCACAGGCGCCC
Internal bar code:ATGACACGGGCACAGAAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:670
LEAP-Seq percent confirming:90.7483
LEAP-Seq n confirming:3796
LEAP-Seq n nonconfirming:387
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGAGAACACGGAGAAGG
Suggested primer 2:TTCACAGCTCAGCATTCCAC