Insertion junction: LMJ.RY0402.135478_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.135478
Chromosome:chromosome 10
Location:2921499
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g440300 SMC5A (1 of 2) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTATGAGAGATGAGGCCAGCGATGGCT
Internal bar code:TAACAGACCTGTCTAGTTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:97.931
LEAP-Seq n confirming:142
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGCGAGTTGAAAGAAGA
Suggested primer 2:GTAACCCTCCCTGCACGTTA