Insertion junction: LMJ.RY0402.044215_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.044215
Chromosome:chromosome 6
Location:3005738
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g273700 HCF136 (1 of 1) PTHR32010//PTHR32010:SF6 - FAMILY NOT NAMED // PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC; Photosystem II stability/assembly factor HCF136 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCTACCCCTACCCTGCACTAGCACTCC
Internal bar code:AGATAATTCAGGTAGATATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:99.5832
LEAP-Seq n confirming:5017
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAACCACGGCTTTATGTC
Suggested primer 2:GGGACTCTGTCTCAAGGCTG