Insertion junction: LMJ.RY0402.045744_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.045744
Chromosome:chromosome 10
Location:1014925
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g425050 ROC59,ROC28 (1 of 1) K11807 - WD and tetratricopeptide repeats protein 1 (WDTC1); Rhythm Of Chloroplast 59 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGTGGTTAGTAATGGTGTGTGTTCCTT
Internal bar code:TTCCCTACGCCACGTATAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:99.5827
LEAP-Seq n confirming:20285
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACCCAGGCCTAGACAC
Suggested primer 2:CTAGCCCCACGAACACAAAT