Insertion junction: LMJ.RY0402.048377_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048377
Chromosome:chromosome 11
Location:391211
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467579 CSC6 Chlamydomonadale-specific family C protein gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGAACCAATTGGACTGTTGGACTGGTG
Internal bar code:GTGGACCAGCGGCATGTTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1131
LEAP-Seq percent confirming:98.0354
LEAP-Seq n confirming:998
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGTGAAAGCTGGAATA
Suggested primer 2:GACGGCATGTCACCCTTAGT