Insertion junction: LMJ.RY0402.049547_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.049547
Chromosome:chromosome 12
Location:3054088
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g500500 SMT1,SMT2,STM1 (1 of 1) 2.1.1.143 - 24-methylenesterol C-methyltransferase / SMT(2); Sterol-C24-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGCTTGAAGACGCCCCACCAGCTGCCA
Internal bar code:CACGGATGCGGTGCACCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:99.0329
LEAP-Seq n confirming:1536
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAGACTGGCCGGAACAC
Suggested primer 2:ACCTGCCTGACTGAGTGCTT