Insertion junction: LMJ.RY0402.050597_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.050597
Chromosome:chromosome 4
Location:2254525
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g220200 (1 of 1) PTHR16254:SF13 - K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTACGCACTGCTGCTAAGCATGGGTCTA
Internal bar code:CTGGAAATGTGCGTATCCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:99.3475
LEAP-Seq n confirming:4263
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGACTTGTGTGCTTTCC
Suggested primer 2:GCTAGCTGGAGTGGGAGTTG