Insertion junction: LMJ.RY0402.051768_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.051768
Chromosome:chromosome 2
Location:3384101
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g095102 VPS5C (1 of 4) PTHR10555:SF84 - SORTING NEXIN-8; Subunit of Retromer complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACTCCACACATCACCCCAGCGGCCCAG
Internal bar code:GTATGGTCGCAACACACGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:99.7639
LEAP-Seq n confirming:5071
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTATGGTACCCCGTCAGC
Suggested primer 2:ACACACCCTCCTCTCCACAC