Insertion junction: LMJ.RY0402.052227_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.052227
Chromosome:chromosome 3
Location:1887887
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGCTTGTGGGACTGGCTTTTGCCAGC
Internal bar code:CTTTTGGGGGCTAGCCATCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCCTTCTCCATTTCC
Suggested primer 2:GCGAAGTATGCCTGAAGAGG